Detailed information of matrix profile UN1304.1

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Profile summary

Name: nhr-28
Matrix ID: UN1304.1
Class: Nuclear receptors with C4 zinc fingers
Family: RXR-related receptors (NR2)
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q17905  
Source: 39438113
Comment: TF classification inferred by sequence similarity of its human homolog

Sequence logo

Frequency matrix

         
A [ 370 102 473 21 16 527 15 523 424 359 ]
C [ 56 81 23 507 16 6 489 11 61 58 ]
G [ 34 322 34 11 5 9 19 8 30 39 ]
T [ 91 46 21 12 514 9 28 9 36 95 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1304.1 UN1304 1 nhr-28 Caenorhabditis elegans
RXR-related receptors (NR2) Nuclear receptors with C4 zinc fingers
     

-log(P-value) = 2.5e-33

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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