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JASPAR
2026
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Select input type
Raw PFM format
JASPAR format
IUPAC format
Select collection
CORE
UNVALIDATED
Select species
All species
Antirrhinum majus
Arabidopsis lyrata subsp. lyrata
Arabidopsis thaliana
Aspergillus nidulans
Bos taurus
Caenorhabditis briggsae
Caenorhabditis elegans
Cannabis sativa
Ciona intestinalis
Cryptococcus neoformans
Dictyostelium discoideum
Drosophila melanogaster
Fragaria x ananassa
Fusarium graminearum
Gallus gallus
Glycine max
Halocynthia roretzi
Histoplasma capsulatum
Homo sapiens
Hordeum vulgare
Lotus japonicus
Malus domestica
Manihot esculenta
Medicago truncatula
Meleagris gallopavo
Mus musculus
Nematostella vectensis
Neurospora crassa
Nicotiana sp.
Nicotiana tabacum
Oncorhynchus mykiss
Oryctolagus cuniculus
Oryza sativa
Oryza sativa Indica Group
Oryza sativa Japonica Group
Ostreococcus tauri
Petroselinum crispum
Petunia x hybrida
Phaeodactylum tricornutum
Physcomitrium patens
Phytophthora ramorum
Populus trichocarpa
Prunus persica
Puccinia graminis
Rattus norvegicus
Rattus rattus
Rhizopus arrhizus
Saccharomyces cerevisiae
Saccharomyces cerevisiae S288C
Schistosoma mansoni
Schizophyllum commune
Schizosaccharomyces pombe
Solanum lycopersicum
Triticum aestivum
Vertebrata
Vitis vinifera
Xenopus laevis
Xenopus tropicalis
Zea mays
Select class
All classes
A.T hook factors
AP2/EREBP
APSES-type DNA-binding domain
ARID
B3
BBR/BPC
Basic helix-loop-helix domain factors (bHLH)
Basic helix-loop-helix factors (bHLH)
Basic helix-span-helix factors (bHSH)
Basic leucine zipper factors (bZIP)
C2CH THAP-type zinc finger factors
C2H2 zinc finger factors
C2HC
C3H zinc finger factors
C3H(C),C2HC zinc-fingers like factors
C6 zinc cluster factors
CH3
CPP
CRC domain
Cold-shock domain factors
Copper-fist DNA-binding domain
DM-type intertwined zinc finger factors
EIL
Fork head/winged helix factors
GCM domain factors
GRAS
Grainyhead domain factors
HC3 zinc ribbon factors
HMG domain factors
Heat shock factors
Helix-Turn-Helix
Heteromeric CCAAT-binding factors
High-mobility group (HMG) domain factors
Homeo domain factor
Homeo domain factors
LEAFY
MADS box factors
NDT80 domain factors
Nuclear receptors with C4 zinc fingers
Other C4 zinc finger-type factors
Other all-alpha-helical DNA-binding domains
PLATZ
Paired box factors
Paired-related HD factors
RING
RING-type zinc finger
RWP-RK
Rel homology region (RHR) factors
Runt domain factors
S1Fa-like
SAND domain factors
SMAD/NF-1 DNA-binding domain factors
STAT domain factors
T-Box factors
T-box factors
TATA-binding proteins
TBrain-related factors
TCP
TEA domain factors
Tryptophan cluster factor
Tryptophan cluster factors
Uncharacterized
Zipper-type
mTERF
p53 domain factors
Select data type
All data types
CAP-SELEX
COMPILED
CUT&RUN
ChEC-seq
ChIP-chip
ChIP-exo
ChIP-seq
DAP-seq
DNaseI footprinting
EMSA
GHT-SELEX
HT-SELEX
HT-SELEX, Methyl-HT-SELEX
High-throughput SELEX SAGE
Misc
NCAP-SELEX
PBM
PBM, CSA and/or DIP-chip
SELEX
SELEX-seq
SMiLE-seq
Transfac
ampDAP-seq
bacterial 1-hybrid
universal protein binding microarray (PBM)
yeast 1-hybrid
Select family
All families
AHL
ALOG
AP-2
AP2
AP2, ERF
ARF
ARID
ARID-related
ATF-4-related
ATF-4-related factors
B-ATF-related factors
BED zinc finger factors
BES/BZR
BTB-POZ
Brachyury-related factors
C2H2
C2H2 zinc finger factors
C4-GATA-related
CAMTA
CEBP-related
CP2-related factors
CREB-related
CREB-related factors
CSL-related factors
D
DEAF
DMRT factors
DOF
Dbp-related factors
E2A
E2F
EBF-related
EIL
ERF
ERF/DREB
Early B-Cell Factor-related factors
Ets-related
FLYWCH1
FOX
FRS/FRF
FTZF1-related (NR5A)
Factors with multiple dispersed zinc fingers
Fos-related
GARP_ARR-B
GARP_G2-like
GCM
GCNF-related receptors (NR6)
GMEB
GRF
Grainyhead-related
Grainyhead-related factors
Group A
Group B
Group C
Group D
Group G
Group H
Group I
Group K
Group S
HD
HD-CUT
HD-LIM
HD-LIM factors
HD-PROS factors
HD-SINE
HD-ZF
HD-ZF factors
HD-ZIP
HMGA
HOX
HOX-related factors
HSF
HSF factors
Hairy-related
Hairy-related factors
Helix-Loop-Helix
Heteromeric CCAAT-binding
High Mobility Group box (HMG)
Homeo
IDD
Interferon-regulatory factors
Jumonji
Jun-related
LAV
LBD
MIKC
MYB
MYB-related
MYRF-related
MYT
Maf-related
More than 3 adjacent zinc fingers
Myb-SANT
Myb/SANT domain factors
MyoD/ASC-related factors
NAC
NF-YB
NF-YC
NF-kappaB-related factors
NFAT-related factors
NFkappaB-related
NGFI-B-related receptors (NR4)
NK
NRF
Nuclear factor 1
Other factors with up to three adjacent zinc fingers
PAS
PAS domain factors
PHD
PLINC
POU domain factors
Paired domain only
Paired plus homeo domain
Paired-related HD
Paired-related HD factors
RAV
REM
RFX-related factors
RXR-related receptors (NR2)
Regulators of differentiation
Rel homology domain (RHD)
Responders to external signals (SRF/RLM1)
Runt-related factors
S
SBP
SMAD factors
SOX-related factors
STAT factors
Sp140-Sp100
Steroid hormone receptors (NR3)
Storekeeper
T-Box factors
TALE-type HD
TALE-type homeo domain factors
TBP-related factors
TBX1-related factors
TBX2-related factors
TBX6-related factors
TBrain-related factors
TCF-7-related factors
TCP
TEF-1-related factors
THAP
THAP-related factors
TOX-related
Tal-related
Tal-related factors
Three-zinc finger Kruppel-related
Thyroid hormone receptor-related factors (NR1)
Trihelix
Type I
Type II
VOZ
WOX
WRKY
XBP-1-related factors
XR-related receptors (NR2)
YABBY
Zinc finger, BED-type
bHLH
bHLH-ZIP
bZIP
group A
p53-related factors
tesmin/TSO1-family
Select Tax group(s)
cnidaria
diatoms
dictyostelium
fungi
insects
nematodes
oomycota
plants
trematodes
urochordates
vertebrates
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