Detailed information of matrix profile UN1182.1

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Profile summary

Name: CLOCK::ISL2
Matrix ID: UN1182.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: PAS domain factors::HD-LIM
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15516   Q96A47  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 27 217 142 41 41 270 133 49 136 95 104 169 36 387 5 46 9 9 ]
C [ 243 129 207 25 92 25 72 132 65 83 77 86 366 5 366 2 13 0 ]
G [ 17 24 21 54 38 51 127 119 117 95 90 139 2 7 3 354 1 369 ]
T [ 118 35 35 285 234 59 73 105 87 132 134 11 1 6 31 3 382 27 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1182.1 UN1182 1 CLOCK::ISL2 Homo sapiens
PAS domain factors::HD-LIM Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: