Detailed information of matrix profile UN1164.1

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Profile summary

Name: VAX2::GABPA
Matrix ID: UN1164.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: NK::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q5SQQ9   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 293 85 61 2 11 530 466 77 3 307 392 5 31 447 ]
C [ 52 326 475 9 7 4 21 32 138 155 88 13 37 13 ]
G [ 163 136 19 545 532 10 10 442 4 52 29 6 17 35 ]
T [ 50 11 3 2 8 14 61 7 413 44 49 534 473 63 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1164.1 UN1164 1 VAX2::GABPA Homo sapiens
NK::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: