Detailed information of matrix profile UN1136.1

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Profile summary

Name: SOX9::TBX21
Matrix ID: UN1136.1
Class: High-mobility group (HMG) domain factors::T-Box factors
Family: SOX-related factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P48436   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 3846 421 30 37 37 154 64 198 324 3479 40 31 116 343 499 ]
C [ 79 259 43 99 47 248 1363 509 3038 52 41 66 136 70 596 ]
G [ 1009 4123 5050 38 5026 472 1965 3911 228 66 36 43 4862 48 847 ]
T [ 230 361 41 4990 54 4290 1772 546 1574 1567 5047 5024 50 4703 3222 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1136.1 UN1136 1 SOX9::TBX21 Homo sapiens
SOX-related factors::TBrain-related factors High-mobility group (HMG) domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: