Detailed information of matrix profile UN1130.1

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Profile summary

Name: SHOX::FLI1
Matrix ID: UN1130.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: Paired-related HD factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15266   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 32 37 1 1 161 116 50 2 100 111 7 20 117 ]
C [ 88 131 0 0 1 5 21 52 25 20 9 14 6 ]
G [ 41 1 168 166 1 1 85 15 32 23 8 13 12 ]
T [ 8 0 0 2 6 47 13 100 12 15 145 122 34 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1130.1 UN1130 1 SHOX::FLI1 Homo sapiens
Paired-related HD factors::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: