Detailed information of matrix profile UN1126.1

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Profile summary

Name: POU3F4::FOXA1
Matrix ID: UN1126.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: POU domain factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P49335   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 191 23 42 139 76 13 167 6 217 156 70 4 190 210 211 3 230 ]
C [ 29 10 17 10 42 242 42 4 9 17 11 92 57 30 6 138 6 ]
G [ 18 5 16 3 114 2 15 0 18 11 157 4 2 6 7 4 19 ]
T [ 23 223 186 109 29 4 37 251 17 77 23 161 12 15 37 116 6 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1126.1 UN1126 1 POU3F4::FOXA1 Homo sapiens
POU domain factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: