Detailed information of matrix profile UN1118.1

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Profile summary

Name: PITX1::TBX21
Matrix ID: UN1118.1
Class: Homeo domain factors::T-Box factors
Family: Paired-related HD factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P78337   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1692 941 7378 56 63 7541 6265 5 8561 148 815 602 ]
C [ 411 635 1449 76 902 725 119 9216 18 8786 6613 972 ]
G [ 6770 7216 119 112 4 254 1532 23 630 294 977 147 ]
T [ 402 483 329 9031 8306 755 1359 31 66 47 870 7554 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0576.1 UN0576 1 PITX1::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
UN1118.1 UN1118 1 PITX1::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: