Detailed information of matrix profile UN1118.1

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Profile summary

Name: PITX1::TBX21
Matrix ID: UN1118.1
Class: Homeo domain factors::T-Box factors
Family: Paired-related HD factors::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P78337   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 7554 870 47 66 31 1359 755 8306 9031 329 483 402 ]
C [ 147 977 294 630 23 1532 254 4 112 119 7216 6770 ]
G [ 972 6613 8786 18 9216 119 725 902 76 1449 635 411 ]
T [ 602 815 148 8561 5 6265 7541 63 56 7378 941 1692 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0576.1 UN0576 1 PITX1::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
UN1118.1 UN1118 1 PITX1::TBX21 Homo sapiens
Paired-related HD factors::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: