Detailed information of matrix profile UN1110.1

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Profile summary

Name: PAX5::HOXB5
Matrix ID: UN1110.1
Class: Paired box factors::Homeo domain factors
Family: Paired domain only::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q02548   P09067  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 37 228 2615 1360 33 221 3007 1497 34 9 605 199 971 3395 88 129 3562 3698 98 146 2041 ]
C [ 1018 2474 136 796 1069 1791 7 597 1242 3502 23 53 149 106 3625 194 51 40 253 495 130 ]
G [ 1097 22 684 1035 32 1788 657 339 2547 43 3126 433 2415 191 42 365 186 56 111 1701 1533 ]
T [ 1693 1121 410 654 2711 45 174 1412 22 291 91 3160 310 153 90 3157 46 51 3383 1503 141 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1110.1 UN1110 1 PAX5::HOXB5 Homo sapiens
Paired domain only::HOX Paired box factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: