Detailed information of matrix profile UN1110.1

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Profile summary

Name: PAX5::HOXB5
Matrix ID: UN1110.1
Class: Paired box factors::Homeo domain factors
Family: Paired domain only::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q02548   P09067  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 141 1503 3383 51 46 3157 90 153 310 3160 91 291 22 1412 174 45 2711 654 410 1121 1693 ]
C [ 1533 1701 111 56 186 365 42 191 2415 433 3126 43 2547 339 657 1788 32 1035 684 22 1097 ]
G [ 130 495 253 40 51 194 3625 106 149 53 23 3502 1242 597 7 1791 1069 796 136 2474 1018 ]
T [ 2041 146 98 3698 3562 129 88 3395 971 199 605 9 34 1497 3007 221 33 1360 2615 228 37 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1110.1 UN1110 1 PAX5::HOXB5 Homo sapiens
Paired domain only::HOX Paired box factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: