Detailed information of matrix profile UN1064.1

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Profile summary

Name: HOXC11::IRF8
Matrix ID: UN1064.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Interferon-regulatory factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q02556  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 5 158 116 133 10 4 4 148 143 130 5 5 52 36 31 14 0 41 160 2 ]
C [ 0 0 2 19 120 76 3 6 1 0 63 18 56 44 10 0 0 2 0 96 ]
G [ 160 2 1 2 12 3 154 8 4 9 92 7 31 62 17 2 0 2 0 0 ]
T [ 0 5 46 11 23 82 4 3 17 26 5 135 26 23 107 149 165 120 5 67 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1064.1 UN1064 1 HOXC11::IRF8 Homo sapiens
HOX::Interferon-regulatory factors Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: