Detailed information of matrix profile UN0901.1

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Profile summary

Name: HOXC11::TGIF2LX
Matrix ID: UN0901.1
Class: Homeo domain factors
Family: HOX::TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q8IUE1  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 135 36 2887 16 2519 52 874 94 187 924 3027 39 310 2035 ]
C [ 259 41 19 3040 27 546 443 31 19 68 31 1647 97 66 ]
G [ 95 3037 133 30 524 1907 656 49 28 157 56 110 2038 846 ]
T [ 2647 22 97 50 66 631 1163 2962 2902 1987 22 1340 691 189 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0901.1 UN0901 1 HOXC11::TGIF2LX Homo sapiens
HOX::TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: