Detailed information of matrix profile UN0901.1

  1. Home
  2. Matrix > UN0901.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXC11::TGIF2LX
Matrix ID: UN0901.1
Class: Homeo domain factors
Family: HOX::TALE-type homeo domain factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O43248   Q8IUE1  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 189 691 1340 22 1987 2902 2962 1163 631 66 50 97 22 2647 ]
C [ 846 2038 110 56 157 28 49 656 1907 524 30 133 3037 95 ]
G [ 66 97 1647 31 68 19 31 443 546 27 3040 19 41 259 ]
T [ 2035 310 39 3027 924 187 94 874 52 2519 16 2887 36 135 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN0901.1 UN0901 1 HOXC11::TGIF2LX Homo sapiens
HOX::TALE-type homeo domain factors Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: