Detailed information of matrix profile MA2729.1

Profile summary

Name: vahox1
Matrix ID: MA2729.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: A0A3Q7FRX5  
Source: GSE172249
Comment: Validated by inference and motif similarity with ATHB-53

Sequence logo

Frequency matrix

A [ 142 1374 1449 6 104 1448 14 25 296 ]
C [ 1040 31 11 5 3 5 5 6 62 ]
G [ 71 7 3 0 7 2 4 11 310 ]
T [ 214 55 4 1456 1353 12 1444 1425 799 ]

Binding sites information

External links