Detailed information of matrix profile MA2729.1

Profile summary

Name: vahox1
Matrix ID: MA2729.1
Class: Homeo domain factors
Family: HD-ZIP
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 27203113
Uniprot ID: A0A3Q7FRX5  
Source: GSE172249
Comment: Validated by inference and motif similarity with ATHB-53

Sequence logo

Frequency matrix

A [ 799 1425 1444 12 1353 1456 4 55 214 ]
C [ 310 11 4 2 7 0 3 7 71 ]
G [ 62 6 5 5 3 5 11 31 1040 ]
T [ 296 25 14 1448 104 6 1449 1374 142 ]

Binding sites information

External links