Detailed information of matrix profile MA2714.1

Profile summary

Name: APETALA2a
Matrix ID: MA2714.1
Class: AP2/EREBP
Family: AP2
Collection: CORE
Taxon: Plants
Species: Solanum lycopersicum
Data Type: DAP-seq
Validation: 24477691
Uniprot ID: B2ZP48  
Source: GSE172249
Comment: Validated by inference and motif similarity with SMZ

Sequence logo

Frequency matrix

A [ 1889 225 866 3131 95 46 10 833 864 21 3321 19 326 2625 ]
C [ 473 500 22 8 3237 3273 5 2494 5 5 15 2482 1598 104 ]
G [ 107 48 55 26 8 46 1 17 2502 18 9 7 118 61 ]
T [ 914 2610 2440 218 43 18 3367 39 12 3339 38 875 1341 593 ]

Binding sites information

External links