Detailed information of matrix profile MA2460.1

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Profile summary
Name: MGH6.1
Matrix ID: MA2460.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9LSI4  
Source: 27203113
Comment: Validated by inference and motif similarity with NAC094 (MA2387)

Sequence logo

Frequency matrix

         
A [ 320 0 0 0 227 330 340 361 227 175 155 732 21 31 21 103 557 ]
C [ 443 1000 10 0 361 62 216 278 196 268 351 268 979 0 361 814 0 ]
G [ 206 0 990 330 247 371 124 103 155 103 237 0 0 969 619 0 443 ]
T [ 31 0 0 670 165 237 320 258 423 454 258 0 0 0 0 82 0 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2460.1 MA2460 1 MGH6.1 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: