Detailed information of matrix profile MA2460.1

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Profile summary
Name: MGH6.1
Matrix ID: MA2460.1
Class: GCM domain factors
Family: NAC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24914054
Uniprot ID: Q9LSI4  
Source: 27203113
Comment: Validated by inference and motif similarity with NAC094 (MA2387)

Sequence logo

Frequency matrix

         
A [ 0 82 0 0 0 0 258 454 423 258 320 237 165 670 0 0 31 ]
C [ 443 0 619 969 0 0 237 103 155 103 124 371 247 330 990 0 206 ]
G [ 0 814 361 0 979 268 351 268 196 278 216 62 361 0 10 1000 443 ]
T [ 557 103 21 31 21 732 155 175 227 361 340 330 227 0 0 0 320 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA2460.1 MA2460 1 MGH6.1 Arabidopsis thaliana
NAC GCM domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

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GC Content: