Detailed information of matrix profile UN1305.1

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Profile summary

Name: sox-2
Matrix ID: UN1305.1
Class: High-mobility group (HMG) domain factors
Family: SOX-related factors
Collection: UNVALIDATED
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation:
Uniprot ID: Q21305  
Source: 39438113
Comment:

Sequence logo

Frequency matrix

         
A [ 5 1 1 69 6 1 5 0 1 7 ]
C [ 15 66 6 1 0 0 0 0 4 41 ]
G [ 5 4 0 0 1 0 63 6 4 7 ]
T [ 50 4 68 5 68 74 7 69 66 20 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1305.1 UN1305 1 sox-2 Caenorhabditis elegans
SOX-related factors High-mobility group (HMG) domain factors
     

-log(P-value) = 2.5e-22

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TFFM detailed profile doesn't exist for this profile.

Description:

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