Detailed information of matrix profile UN1288.1

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Profile summary

Name: TraesCS7A02G299600
Matrix ID: UN1288.1
Class: GCM domain factors
Family: NAC
Collection: UNVALIDATED
Taxon: Plants
Species: Triticum aestivum
Data Type: DAP-seq
Validation:
Uniprot ID: A0A3B6RGM2  
Source: 36376315
Comment:

Sequence logo

Frequency matrix

         
A [ 47 13 12 52 0 1 0 82 56 8 15 65 4 2 112 111 1 8 96 94 39 ]
C [ 18 2 0 13 111 1 0 18 4 29 41 12 48 6 0 0 1 48 3 1 4 ]
G [ 3 1 3 40 1 0 0 9 47 9 39 30 5 19 0 0 109 13 1 2 21 ]
T [ 44 96 97 7 0 110 112 3 5 66 17 5 55 85 0 1 1 43 12 15 48 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1288.1 UN1288 1 TraesCS7A02G299600 Triticum aestivum
NAC GCM domain factors
     

-log(P-value) = 1.7e-21

TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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