Detailed information of matrix profile UN1209.1

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Profile summary

Name: GATA5::FLI1
Matrix ID: UN1209.1
Class: Other C4 zinc finger-type factors::Tryptophan cluster factor
Family: C4-GATA-related::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q9BWX5   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 54 239 29 24 120 47 110 95 85 68 54 36 185 8 111 11 2 0 4 16 ]
C [ 46 22 43 264 27 87 95 81 122 115 89 119 40 169 2 7 333 342 10 91 ]
G [ 22 40 30 22 90 105 80 76 53 65 115 98 100 24 22 7 6 0 274 198 ]
T [ 222 43 242 34 107 105 59 92 84 96 86 91 19 143 209 319 3 2 56 39 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1209.1 UN1209 1 GATA5::FLI1 Homo sapiens
C4-GATA-related::Ets-related Other C4 zinc finger-type factors::Tryptophan cluster factor
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: