Detailed information of matrix profile UN1205.1

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Profile summary

Name: GATA3::ONECUT1
Matrix ID: UN1205.1
Class: Other C4 zinc finger-type factors::Homeo domain factors
Family: C4-GATA-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P23771   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1105 51 16 305 1139 67 483 236 315 267 243 364 313 364 1073 86 212 ]
C [ 17 36 971 51 31 57 380 121 304 378 411 387 222 46 32 70 833 ]
G [ 130 16 34 906 82 34 107 450 269 332 308 300 146 236 43 82 36 ]
T [ 60 1209 291 50 60 1154 342 505 424 335 350 261 631 666 164 1074 231 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1205.1 UN1205 1 GATA3::ONECUT1 Homo sapiens
C4-GATA-related::HD-CUT Other C4 zinc finger-type factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: