Detailed information of matrix profile UN1198.1

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Profile summary

Name: ETV5::ONECUT1
Matrix ID: UN1198.1
Class: Tryptophan cluster factors::Homeo domain factors
Family: Ets-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P41161   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 430 105 54 0 1 684 580 178 43 369 124 220 115 310 681 20 5 65 657 10 ]
C [ 90 431 641 3 2 12 36 55 73 156 283 99 118 53 3 6 551 11 10 37 ]
G [ 108 109 8 703 703 6 19 449 295 98 239 227 236 142 7 8 19 615 33 4 ]
T [ 78 61 3 0 0 4 71 24 295 83 60 160 237 201 15 672 131 15 6 655 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1198.1 UN1198 1 ETV5::ONECUT1 Homo sapiens
Ets-related::HD-CUT Tryptophan cluster factors::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: