Detailed information of matrix profile UN1196.1

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Profile summary

Name: ERG::TBX6
Matrix ID: UN1196.1
Class: Tryptophan cluster factors::T-Box factors
Family: Ets-related::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P11308   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 173 949 2150 6 3013 10 90 308 685 522 537 1643 41 731 43 30 30 42 139 429 ]
C [ 854 1274 281 3253 19 3238 2345 903 1261 1320 1657 472 2176 53 58 3208 3205 118 1047 1325 ]
G [ 101 860 490 0 222 18 477 161 446 715 424 964 120 75 44 15 11 2392 1685 197 ]
T [ 2138 183 345 7 12 0 354 1894 874 709 648 187 929 2407 3121 13 20 714 395 1315 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1196.1 UN1196 1 ERG::TBX6 Homo sapiens
Ets-related::TBX6-related factors Tryptophan cluster factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: