Detailed information of matrix profile UN1191.1

  1. Home
  2. Matrix > UN1191.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: EGR1::TBX6
Matrix ID: UN1191.1
Class: C2H2 zinc finger factors::T-Box factors
Family: C2H2 zinc finger factors::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P18146   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 33 166 12 27 162 40 90 509 391 242 240 337 471 925 142 71 93 113 226 ]
C [ 14 27 79 11 1070 10 60 170 337 318 325 209 188 78 204 57 195 45 162 ]
G [ 573 1440 1509 1608 27 1556 752 646 634 640 742 741 612 459 1145 1434 185 1438 292 ]
T [ 1036 23 56 10 397 50 754 331 294 456 349 369 385 194 165 94 1183 60 976 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1191.1 UN1191 1 EGR1::TBX6 Homo sapiens
C2H2 zinc finger factors::TBX6-related factors C2H2 zinc finger factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: