Detailed information of matrix profile UN1190.1

  1. Home
  2. Matrix > UN1190.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: DUXA::TBX4
Matrix ID: UN1190.1
Class: Homeo domain factors::T-Box factors
Family: Paired-related HD factors::TBX2-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: A6NLW8   P57082  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1 1 9 160 131 285 134 157 157 207 163 491 811 48 67 63 680 791 14 2 664 ]
C [ 24 69 0 59 184 52 223 160 234 166 106 14 3 175 215 312 50 6 7 761 19 ]
G [ 779 9 804 41 253 370 229 273 249 173 63 306 1 198 147 19 65 7 12 16 58 ]
T [ 14 739 5 558 250 111 232 228 178 272 486 7 3 397 389 424 23 14 785 39 77 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1190.1 UN1190 1 DUXA::TBX4 Homo sapiens
Paired-related HD factors::TBX2-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: