Detailed information of matrix profile UN1177.1

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Profile summary

Name: BHLHE22::OTP
Matrix ID: UN1177.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::Paired-related HD factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q8NFJ8   Q5XKR4  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 282 2304 2667 8 183 1137 790 685 1829 972 65 2421 13 2624 62 6 58 ]
C [ 45 14 0 62 393 170 476 547 77 929 2606 8 10 19 216 1 597 ]
G [ 43 295 9 97 728 1096 1053 449 609 726 3 218 31 24 4 2592 1013 ]
T [ 2307 64 1 2510 1373 274 358 996 162 50 3 30 2623 10 2395 78 1009 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1177.1 UN1177 1 BHLHE22::OTP Homo sapiens
Tal-related::Paired-related HD factors Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: