Detailed information of matrix profile UN1173.1

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Profile summary

Name: ATOH1::ONECUT1
Matrix ID: UN1173.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::HD-CUT
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92858   Q9UBC0  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 448 6376 114 5159 222 50 451 1192 2551 1758 1849 2072 6642 339 177 1421 6820 388 ]
C [ 6873 53 702 1437 693 30 1963 2274 1742 1344 1364 757 95 133 5029 57 92 940 ]
G [ 68 821 1613 826 55 7031 2402 768 1704 1581 1917 2169 366 40 139 5902 124 99 ]
T [ 88 227 5048 55 6507 366 2661 3243 1480 2794 2347 2479 374 6965 2132 97 441 6050 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1173.1 UN1173 1 ATOH1::ONECUT1 Homo sapiens
Tal-related::HD-CUT Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: