Detailed information of matrix profile UN1172.1

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Profile summary

Name: ATOH1::HOXC10
Matrix ID: UN1172.1
Class: Basic helix-loop-helix factors (bHLH)::Homeo domain factors
Family: Tal-related::HOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92858   Q9NYD6  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 6 236 0 223 5 0 12 39 55 45 59 13 13 62 253 21 25 165 ]
C [ 269 0 20 40 14 0 58 83 112 75 21 7 7 7 6 107 7 22 ]
G [ 1 29 76 12 1 264 89 65 55 101 33 27 8 7 12 7 185 75 ]
T [ 0 11 180 1 256 12 117 89 54 55 163 229 248 200 5 141 59 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1172.1 UN1172 1 ATOH1::HOXC10 Homo sapiens
Tal-related::HOX Basic helix-loop-helix factors (bHLH)::Homeo domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: