Detailed information of matrix profile UN1161.1

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Profile summary

Name: USF2::GABPA
Matrix ID: UN1161.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: bHLH-ZIP::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q15853   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 143 0 19 0 2 0 1 3 4 5 182 0 67 12 0 ]
C [ 11 158 1 1 186 189 3 6 7 182 3 169 9 9 6 ]
G [ 29 3 1 1 1 0 176 176 1 1 3 9 113 8 179 ]
T [ 6 28 168 187 0 0 9 4 177 1 1 11 0 160 4 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1161.1 UN1161 1 USF2::GABPA Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: