Detailed information of matrix profile UN1155.1

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Profile summary

Name: TFE3::GABPA
Matrix ID: UN1155.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: bHLH-ZIP::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P19532   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 5 69 2 17 10 5 109 6 16 0 3 112 82 38 ]
C [ 114 10 92 7 11 3 8 108 99 2 1 5 7 8 ]
G [ 3 25 7 96 3 112 4 4 5 120 116 3 2 75 ]
T [ 0 18 21 2 98 2 1 4 2 0 2 2 31 1 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1155.1 UN1155 1 TFE3::GABPA Homo sapiens
bHLH-ZIP::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: