Detailed information of matrix profile UN1146.1

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Profile summary

Name: CLOCK::RUNX2
Matrix ID: UN1146.1
Class: Basic helix-loop-helix factors (bHLH)::Runt domain factors
Family: PAS domain factors::Runt-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15516   Q13950  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 13 752 0 18 0 3 4 36 44 34 20 16 99 26 ]
C [ 763 2 758 1 6 0 436 74 34 597 31 39 77 377 ]
G [ 0 23 0 759 11 675 18 66 648 40 688 707 113 38 ]
T [ 2 1 20 0 761 100 320 602 52 107 39 16 489 337 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1146.1 UN1146 1 CLOCK::RUNX2 Homo sapiens
PAS domain factors::Runt-related factors Basic helix-loop-helix factors (bHLH)::Runt domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: