Detailed information of matrix profile UN1144.1

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Profile summary

Name: TCF12::FOXA1
Matrix ID: UN1144.1
Class: Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
Family: E2A::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q99081   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 19 1380 26 24 10 210 426 273 21 1131 1148 1299 6 1279 ]
C [ 1361 4 705 1300 0 4 74 41 575 199 145 41 848 31 ]
G [ 5 6 594 59 0 1176 54 954 12 18 34 24 8 54 ]
T [ 17 12 77 19 1392 12 848 134 794 54 75 38 540 38 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1144.1 UN1144 1 TCF12::FOXA1 Homo sapiens
E2A::FOX Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: