Detailed information of matrix profile UN1144.1

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Profile summary

Name: TCF12::FOXA1
Matrix ID: UN1144.1
Class: Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
Family: E2A::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q99081   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 38 540 38 75 54 794 134 848 12 1392 19 77 12 17 ]
C [ 54 8 24 34 18 12 954 54 1176 0 59 594 6 5 ]
G [ 31 848 41 145 199 575 41 74 4 0 1300 705 4 1361 ]
T [ 1279 6 1299 1148 1131 21 273 426 210 10 24 26 1380 19 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1144.1 UN1144 1 TCF12::FOXA1 Homo sapiens
E2A::FOX Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: