Detailed information of matrix profile UN1142.1

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Profile summary

Name: CLOCK::FOXD2
Matrix ID: UN1142.1
Class: Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
Family: PAS domain factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15516   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 308 43 634 4 93 3 4 0 54 174 48 175 592 439 421 81 577 618 637 4 547 ]
C [ 254 591 4 570 5 13 0 95 322 139 165 1 1 142 0 131 60 20 1 613 9 ]
G [ 83 4 8 0 541 1 582 134 85 288 37 11 49 42 220 3 3 0 6 0 10 ]
T [ 1 8 0 72 7 629 60 417 185 45 396 459 4 23 5 431 6 8 2 29 80 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1142.1 UN1142 1 CLOCK::FOXD2 Homo sapiens
PAS domain factors::FOX Basic helix-loop-helix factors (bHLH)::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: