Detailed information of matrix profile UN1141.1

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Profile summary

Name: TBX3::GABPA
Matrix ID: UN1141.1
Class: T-Box factors::Tryptophan cluster factors
Family: TBX2-related factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O15119   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 295 63 4 3 4 23 34 431 7 75 6 1 0 0 6 26 ]
C [ 28 63 13 19 5 77 130 3 292 2 0 444 444 0 67 65 ]
G [ 64 292 418 1 436 6 82 7 45 12 2 0 0 424 309 29 ]
T [ 58 27 10 422 0 339 199 4 101 356 437 0 1 21 63 325 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1141.1 UN1141 1 TBX3::GABPA Homo sapiens
TBX2-related factors::Ets-related T-Box factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: