Detailed information of matrix profile UN1138.1

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Profile summary

Name: SPIB::TBX4
Matrix ID: UN1138.1
Class: Tryptophan cluster factors::T-Box factors
Family: Ets-related::TBX2-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q01892   P57082  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 188 4 9 4 6 2 7 15 87 60 36 42 39 66 150 3 202 3 13 27 45 ]
C [ 25 222 23 15 233 233 86 168 36 39 74 109 139 100 44 241 9 239 177 61 139 ]
G [ 17 15 4 4 3 4 81 24 6 6 20 51 26 72 22 1 30 4 36 9 19 ]
T [ 17 6 211 224 5 8 73 40 118 142 117 45 43 9 31 2 6 1 21 150 44 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1138.1 UN1138 1 SPIB::TBX4 Homo sapiens
Ets-related::TBX2-related factors Tryptophan cluster factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: