Detailed information of matrix profile UN1137.1

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Profile summary

Name: SOX9::TBX6
Matrix ID: UN1137.1
Class: High-mobility group (HMG) domain factors::T-Box factors
Family: SOX-related factors::TBX6-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P48436   O95947  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 319 840 1666 0 2574 2 97 75 2497 8 3 60 39 169 ]
C [ 400 1083 49 2567 0 2565 1663 615 14 120 17 32 40 460 ]
G [ 10 440 618 1 17 12 724 9 61 18 2 2486 1 198 ]
T [ 1864 230 260 25 2 14 109 1894 21 2447 2571 15 2513 1766 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1137.1 UN1137 1 SOX9::TBX6 Homo sapiens
SOX-related factors::TBX6-related factors High-mobility group (HMG) domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: