Detailed information of matrix profile UN1135.1

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Profile summary

Name: SOX30::TBX4
Matrix ID: UN1135.1
Class: High-mobility group (HMG) domain factors::T-Box factors
Family: SOX-related factors::TBX2-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O94993   P57082  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 1678 3113 168 3232 3150 480 384 812 2119 2271 3377 195 0 22 13 362 90 2171 ]
C [ 393 233 2984 92 222 120 942 626 381 169 31 144 36 244 10 335 1035 136 ]
G [ 1479 197 220 187 187 302 1716 2035 903 820 209 3278 3675 48 3699 159 1468 1174 ]
T [ 172 179 350 211 163 2820 680 249 319 462 105 105 11 3408 0 2866 1129 241 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1135.1 UN1135 1 SOX30::TBX4 Homo sapiens
SOX-related factors::TBX2-related factors High-mobility group (HMG) domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: