Detailed information of matrix profile UN1121.1

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Profile summary

Name: PITX3::FOXA1
Matrix ID: UN1121.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O75364   P55317  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 21 118 15 11 24 234 22 172 30 272 185 42 16 317 0 14 348 ]
C [ 5 11 17 2 7 2 276 35 90 10 36 13 55 61 0 19 1 ]
G [ 24 262 5 40 63 152 17 29 18 17 116 327 290 4 0 0 9 ]
T [ 343 2 356 340 299 5 78 157 255 94 56 11 32 11 393 360 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1121.1 UN1121 1 PITX3::FOXA1 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: