Detailed information of matrix profile UN1117.1

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Profile summary

Name: PITX1::FOXD2
Matrix ID: UN1117.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P78337   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 592 228 59 67 285 3336 26 1096 110 4215 3212 388 429 4810 24 184 5494 ]
C [ 368 4 228 24 7 15 2351 480 750 14 261 425 564 1019 24 506 81 ]
G [ 162 5943 8 256 892 2283 233 1171 57 156 1647 5275 5134 82 26 81 123 ]
T [ 5062 9 5889 5837 5000 550 3574 3437 5267 1799 1064 96 57 273 6110 5413 486 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1117.1 UN1117 1 PITX1::FOXD2 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: