Detailed information of matrix profile UN1117.1

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Profile summary

Name: PITX1::FOXD2
Matrix ID: UN1117.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P78337   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 486 5413 6110 273 57 96 1064 1799 5267 3437 3574 550 5000 5837 5889 9 5062 ]
C [ 123 81 26 82 5134 5275 1647 156 57 1171 233 2283 892 256 8 5943 162 ]
G [ 81 506 24 1019 564 425 261 14 750 480 2351 15 7 24 228 4 368 ]
T [ 5494 184 24 4810 429 388 3212 4215 110 1096 26 3336 285 67 59 228 592 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1117.1 UN1117 1 PITX1::FOXD2 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: