Detailed information of matrix profile UN1116.1

  1. Home
  2. Matrix > UN1116.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: PDX1::TBX4
Matrix ID: UN1116.1
Class: Homeo domain factors::T-Box factors
Family: HOX::TBX2-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P52945   P57082  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 5519 105 8092 143 745 111 3500 6470 171 617 6653 ]
C [ 368 8106 62 7912 6698 922 4498 602 355 1246 275 ]
G [ 1212 67 313 395 613 33 189 1118 120 510 476 ]
T [ 1448 269 80 97 491 7481 360 357 7901 6174 1143 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1116.1 UN1116 1 PDX1::TBX4 Homo sapiens
HOX::TBX2-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: