Detailed information of matrix profile UN1106.1

  1. Home
  2. Matrix > UN1106.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: OTX2::FOXD2
Matrix ID: UN1106.1
Class: Homeo domain factors::Fork head/winged helix factors
Family: Paired-related HD factors::FOX
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P32243   O60548  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 15 10 7 9 16 100 8 36 2 76 68 25 31 16 100 6 14 100 ]
C [ 12 8 8 1 0 2 66 27 38 5 10 45 18 18 32 3 16 7 ]
G [ 6 134 2 10 19 38 13 34 7 11 40 57 82 91 7 8 4 20 ]
T [ 125 6 141 138 123 18 71 61 111 66 40 31 27 33 19 141 124 31 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1106.1 UN1106 1 OTX2::FOXD2 Homo sapiens
Paired-related HD factors::FOX Homeo domain factors::Fork head/winged helix factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: