Detailed information of matrix profile UN1078.1

  1. Home
  2. Matrix > UN1078.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: BHLHE40::FLI1
Matrix ID: UN1078.1
Class: Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
Family: Hairy-related factors::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: O14503   Q01543  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 580 8762 412 837 563 551 9072 24 2019 41 64 8 8 314 1210 ]
C [ 8947 342 8357 565 1120 789 437 6842 14 17 9961 10029 66 1589 2464 ]
G [ 186 567 450 8042 573 8100 438 235 161 20 3 5 8222 6355 745 ]
T [ 335 377 829 604 7792 608 101 2947 7854 9970 20 6 1752 1790 5629 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1078.1 UN1078 1 BHLHE40::FLI1 Homo sapiens
Hairy-related factors::Ets-related Basic helix-loop-helix factors (bHLH)::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: