Detailed information of matrix profile UN1071.1

  1. Home
  2. Matrix > UN1071.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: HOXD4::TBX21
Matrix ID: UN1071.1
Class: Homeo domain factors::T-Box factors
Family: HOX::TBrain-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P09016   Q9UL17  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 875 102 844 2076 5 3333 40 428 43 1242 2691 111 276 2594 ]
C [ 361 381 2063 68 3387 9 3272 2306 377 1997 180 95 550 186 ]
G [ 392 24 375 1059 4 62 85 254 4 21 356 53 93 141 ]
T [ 1781 2902 127 206 13 5 12 421 2985 149 182 3150 2490 488 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1071.1 UN1071 1 HOXD4::TBX21 Homo sapiens
HOX::TBrain-related factors Homeo domain factors::T-Box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: