Detailed information of matrix profile UN1068.1

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Profile summary

Name: HOXD10::GABPA
Matrix ID: UN1068.1
Class: Homeo domain factors::Tryptophan cluster factors
Family: HOX::Ets-related
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: P28358   Q06546  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 292 146 45 571 1992 36 97 1775 16 123 93 130 17 38 52 ]
C [ 208 59 64 46 59 944 112 10 1794 51 29 1871 2052 65 301 ]
G [ 299 144 82 66 40 47 1282 301 120 71 71 70 32 1901 1576 ]
T [ 1325 1775 1933 1441 33 1097 633 38 194 1879 1931 53 23 120 195 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1068.1 UN1068 1 HOXD10::GABPA Homo sapiens
HOX::Ets-related Homeo domain factors::Tryptophan cluster factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: