Detailed information of matrix profile UN1059.1

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Profile summary

Name: HOXB13::SOX11
Matrix ID: UN1059.1
Class: Homeo domain factors::High-mobility group (HMG) domain factors
Family: HOX::SOX-related factors
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: Q92826   P35716  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 2103 67 2151 2066 1056 586 540 639 223 922 1520 42 1457 1898 1625 ]
C [ 50 1843 33 101 136 112 625 840 982 755 65 282 52 130 263 ]
G [ 44 97 59 54 41 1432 936 656 103 112 533 25 125 65 121 ]
T [ 90 280 44 66 1054 157 186 152 979 498 169 1938 653 194 278 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1059.1 UN1059 1 HOXB13::SOX11 Homo sapiens
HOX::SOX-related factors Homeo domain factors::High-mobility group (HMG) domain factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: