Detailed information of matrix profile UN1046.1

  1. Home
  2. Matrix > UN1046.1
This profile is unvalidated. Please help our curators to validate profiles by performing experiments and/or by pointing to literature.

Community curation

Your email will only be used by our team to contact you.

If your contribution is significant, we will acknowledge it in the manuscript of the JASPAR upcoming release. We do not share your information with any third parties.

Profile summary

Name: GSX1::PAX2
Matrix ID: UN1046.1
Class: Homeo domain factors::Paired box factors
Family: HOX::Paired domain only
Collection: UNVALIDATED
Taxon: Vertebrates
Species: Homo sapiens
Data Type: CAP-SELEX
Validation:
Uniprot ID: A4IFQ3   Q02962  
Source: 40205063
Comment:

Sequence logo

Frequency matrix

         
A [ 492 24 43 451 11 98 58 539 26 85 5 222 54 38 438 143 37 213 210 ]
C [ 90 53 115 167 16 57 397 82 591 5 496 90 219 303 21 244 275 17 290 ]
G [ 91 34 26 63 677 48 63 48 8 637 224 83 4 298 268 186 48 434 217 ]
T [ 56 618 545 48 25 526 211 60 104 2 4 334 452 90 2 156 369 65 12 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
UN1046.1 UN1046 1 GSX1::PAX2 Homo sapiens
HOX::Paired domain only Homeo domain factors::Paired box factors
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: